BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F12LP1|AL430098
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1644 1730 0.0
>3x_Contig1644
Length = 13148
Score = 1730 bits (872), Expect = 0.0
Identities = 881/885 (99%)
Strand = Plus / Plus
Query: 1 tagttctctttttagatcttggattagaggaactggtaggagagttttctgatgaaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6083 tagttctctttttagatcttggattagaggaactggtaggagagttttctgatgaaggta 6142
Query: 61 acacggtatttatcatcgggggagatttgaaaagttgggaatcatacatcgtaggaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6143 acacggtatttatcatcgggggagatttgaaaagttgggaatcatacatcgtaggaaatg 6202
Query: 121 tcgtctgattttgtgctgacatgatagatgaatgctctaatattggtgtgtccaaaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6203 tcgtctgattttgtgctgacatgatagatgaatgctctaatattggtgtgtccaaaagtt 6262
Query: 181 cttggtcagaatgtctcgaaaccagcggagacttcttcacaggcgtatctggtattgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6263 cttggtcagaatgtctcgaaaccagcggagacttcttcacaggcgtatctggtattgtca 6322
Query: 241 acttcttgggtagaattgtttgtttcattttggaaataaggccagatgactgaaaagcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6323 acttcttgggtagaattgtttgtttcattttggaaataaggccagatgactgaaaagcta 6382
Query: 301 caggatccggttttgcttctgtaaacgaattattactttttcctgtagtcttagtggagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6383 caggatccggttttgcttctgtaaacgaattattactttttcctgtagtcttagtggagg 6442
Query: 361 acaaatcactagatgttgcagcattcgtactatgccaactctttaaatatgcagcattgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6443 acaaatcactagatgttgcagcattcgtactatgccaactctttaaatatgcagcattgt 6502
Query: 421 tcttggaaaatggagaggatatattgaatccagtcttgctcacagttctctttaaactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6503 tcttggaaaatggagaggatatattgaatccagtcttgctcacagttctctttaaactat 6562
Query: 481 tagatgctgaattggaggcacttgtagtgatgaggggcctttgaagctgtggtactctgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6563 tagatgctgaattggaggcacttgtagtgatgaggggcctttgaagctgtggtactctgc 6622
Query: 541 tgtcgatatgggactgattttcctcattaaacttttgatctttcacatcaggcgtttcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6623 tgtcgatatgggactgattttcctcattaaacttttgatctttcacatcaggcgtttcag 6682
Query: 601 tctccaatgaaagattgagaacaccaacacttctcgtaagacccaacggagtgncattag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 6683 tctccaatgaaagattgagaacaccaacacttctcgtaagacccaacggagtgtcattag 6742
Query: 661 aattagatcttgaactcagaggttccgagtaaaacttgagattattggaattgttactga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6743 aattagatcttgaactcagaggttccgagtaaaacttgagattattggaattgttactga 6802
Query: 721 agtgcgaaastgggtcatagtaatgaaactcaacgtccaggtccatatccgtatcaagat 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6803 agtgcgaaagctggtcatagtaatgaaactcaacgtccaggtccatatccgtatcaagat 6862
Query: 781 cgacatcactttggtatgcatggtcagtctcttcttcatttatgtcttggtaaacttcta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6863 cgacatcactttggtatgcatggtcagtctcttcttcatttatgtcttggtaaacttcta 6922
Query: 841 cccgaggtgaaagtgcagtgttgacagttacgcgcccaaagtttg 885
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6923 cccgaggtgaaagtgcagtgttgacagttacgcgcccaaagtttg 6967
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6508
Number of Sequences: 1807
Number of extensions: 6508
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)